Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPK-LVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
3A35 Chain:A ((1-181))
MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYFDI-DQAINTTTFRELEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINYPKNLSITTNLGTLEKGSDVNVETLN--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101821 for 1419 contacts (-71.8/contact) +
2D Compatibility (PS) -18251 + (NN) 4559 + (LL) 2220
1D Compatibility (HY) -12800 + (ID) 2250
Total energy: -128343.0 ( -90.45 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_3A35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A35-query.scw
PDB file :
Tito_Scwrl_3A35.pdb
: