Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLLVDGKWVDQWYDTASTGGKFVRTVTQFRHWVTKDGSAGPSGDAGFKAESGRYHLYVSLACPWASRVLIMRKLKNLESHISISIVNPLMLENGWTFQEYKGVIPDMINQSQYLYQIYQASQSDYTGRVTVPVLWDKKCHTIVNNESSEIMRMLN---TAFNHITGNTDDYYPDSLQGQIDEMNNFIYPKINNGVYKAGFATSQNVYQKEVETLFTALDQLEKHLSDNHYLVGEQFTEADIRLFTTLVRFDTVYYGHFKCNLKALHDYPHLWHYTKRIYNLPGIAETVNFDHIKKHYYGSHKTINPTGIIPAGPNLDWTI |
4PTS Chain:A ((27-307)) | ---------------------------KYIETRITADGRDG------YPVEPGRYRLIAARACPWANRTLIVRRLLGLENVLSLGLCGPTHDKNSWTFDLDPGGV-DPVLGIPRLKDAYEKRFPGYPKGITVPAVVEIATGEVVTNDFPQITIDFSLEWTAYHR--DGAPQLYPEHLRAEIDEVSKGIYTEVNNGVYRCGFAGSQDAYDAAYDRLFTKLDELSERLAQQRYLVGDTITEADVRLFTTLARFDAVYHGHFKCNRSKLSEMPVLWAYARDLFQTPGFGDTTDFTQIKQHYYIVHSDINPTQIVPKGPDLRNWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176930 for 2266 contacts (-78.1/contact) +
2D Compatibility (PS) -29373 + (NN) -11371 + (LL) 1240
1D Compatibility (HY) -22400 + (ID) 5750
Total energy: -244584.0 ( -107.94 by residue)
QMean score : 0.485
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