Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTD-ILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVTGLKEMLWSVDTEDWKNHNT-QAMMTNIKKQLRPGGVILMHDI----HQTSIDALPTIMDYLITQGYYFVTVGELYSTP |
2C79 Chain:A ((7-190)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALTFDDGPDNVLTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNVDLV-FVGGLTANDWIPSTTAEQRAAAVINGVRDGTIILLHDVQPEPHPTP-EALDIIIPTLKSRGYEFVTLTELFTLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74755 for 1489 contacts (-50.2/contact) +
2D Compatibility (PS) -19383 + (NN) -11851 + (LL) 18700
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -104339.0 ( -70.07 by residue)
QMean score : 0.498
|
|
|