Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITTLILASSLLLVATTSVKADDNFEMPTRYVKMSEKSKAFYQRLQEKQRKAHTTVKTFNNSEIRHQLPLKQEKARNDIYNLGILISQESKGFIQRIDNAYSLENVSDIVNEAQALYKRNYDLFEKIKSTRDKVQVLLASHQDNTDLKNFYAELDDMYEHVYLNESRVEAINRNIQKYN |
2NXV Chain:A ((7-63)) | ----------------------------------------------------------------------------------------------YVQDKDESTLMFSVCSLVRD-QAKYDRLLESFERFGFTPDKAEFLAADNREGNQFHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2547 for 268 contacts (9.5/contact) +
2D Compatibility (PS) -6047 + (NN) -3122 + (LL) 7696
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -2926.0 ( -10.92 by residue)
QMean score : 0.272
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