Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFNRKKLKFLGISLATLTATTVTLVACGNESKNSGDNKVINWYIPTEISTLDISKNTDAYSNLAIGNSGSNLLRIDKEGKPKPDLAKKVSVSSDGLTYTATLRDNLKWSDGSKLSAEDFVYTWRRIVDPKTASEYAYLATESHLLNADKINSGDIKDLNKLGVTAKGNQVTFKLT--SPCPQFKYYLAFSNFMPQKQSYVEKVGKDYGTTSKNQIYSGPYLVKDWNGSNGKFKLVKNKYYWDSKHVKTNSVIVQTIKKPDTAVQMYKQGQIDFA--------------EISGTSAI-------YNQTGSVKALTNQ-KIRQALNLATDRKGVVKAAVDTGSTPAESLVPKKLAKLPNGEDLSKYTAP-GYTYNTSKAQKLFKEGLAEVGQSSLKLTITAD---SDSPAAKNAVDYVKSTWESALPGLTVEEKFVTFKQRLEDAKNENFDVVLFSWGGDYPEGSTFYGLFTTNSAYNYGKFSSKEYDNAYQKAITTDALKPGDAAND---YKTAEKALFDQSYYNPVYYLGKKGLQNSKLKGLVRNSTGLNVDFTYAYKTE |
| 1JEV Chain:A ((21-484)) | -----------------------------------------------SEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWE-NKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGK-KPATDLGVKALDDH-TFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFG-DKWTQPANIVTNGAYKLKNW-VVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPY-------TDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADK-PLTFDLLYNTSDLHKKLAIAVASIWKKNL-GVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDK-----LIADTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4044 for 3518 contacts (-1.1/contact) +
2D Compatibility (PS) -46715 + (NN) -19118 + (LL) 4128
1D Compatibility (HY) -15600 + (ID) 7400
Total energy: -88749.0 ( -25.23 by residue)
QMean score : 0.412
|
|
|