Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNC--KIKHL--NDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCI-----DDINIYEATKHA-----MIDAVSHLSVAPEHLLIDAMVLD-----------LSIPQTKIIKGDANSLS--IAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEG-LQKYG-ITPIHRKSFEPIKSML |
1IO2 Chain:A ((3-204)) | -----------------------------------------------------------------------IAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEIL--------GVLDDYVILELPPDVIGSREGTLNEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERLNFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81587 for 1287 contacts (-63.4/contact) +
2D Compatibility (PS) -18498 + (NN) -6531 + (LL) 7876
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -114690.0 ( -89.11 by residue)
QMean score : 0.454
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