Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
| 2GQ0 Chain:A ((414-485)) | ----------------------------------------------------------------------------------------------------------------VSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLEL-LRKKGIEVLLLSDRI--DEWMMNYLTE--FDGKPFQSVSK---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9152 for 434 contacts (21.1/contact) +
2D Compatibility (PS) -7540 + (NN) -538 + (LL) 17976
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: 10750.0 ( 24.77 by residue)
QMean score : 0.089
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