Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFEKRQVYYVVITFAICYAIQAYWGAVSNILTTLHKAIFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFSIVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLGSTGKTFHYVRHIL--HQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRARTYR |
4RRT Chain:A ((348-438)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51598 for 428 contacts (-120.6/contact) +
2D Compatibility (PS) -8980 + (NN) 1983 + (LL) 22048
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -43247.0 ( -101.04 by residue)
QMean score : -0.255
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