Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFEKRQVYYVVITFAICYAIQAYWGAVSNILTTLHKAIFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFSIVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLGSTGKTFHYVRHIL--HQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRARTYR
4RRT Chain:A ((348-438))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPR-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51598 for 428 contacts (-120.6/contact) +
2D Compatibility (PS) -8980 + (NN) 1983 + (LL) 22048
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -43247.0 ( -101.04 by residue)
QMean score : -0.255

(partial model without unconserved sides chains):
PDB file : Tito_4RRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RRT-query.scw
PDB file : Tito_Scwrl_4RRT.pdb: