Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRLEIVDSKLRQAKKTEEYFNAIRTNIQFSGKENKILAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSGTFKATGTIKGLTNYLSGNADLGDIICETNVPRLMVVPSGKVPPNPTALLQNAYFNKMIEAIKNIFDYIIIDTPPIGLVVDAAIIANACDGFILVTQAGRIKRNYVEKAKEQMEQSGSKFLGIILNKVNESVATYGDYGDYGNYGKRDRKRK
1ION Chain:A ((2-176))
----------------------------------TRIISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNITLHDVLAGDAKLEDAIYMTQFENVYILP-GAVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCPA-GLQLRAMSAMLSGEEAILVTNPEISCLTDTMKVGMVLKKAGLAILGFILNRYGRSERDIPPEAAQDVMDVPLLAVI
General information:
TITO was launched using:
RESULT:
Template:
1ION.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97243 for 1520 contacts (-64.0/contact) +
2D Compatibility (PS) -19232 + (NN) -6103 + (LL) 3088
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -131890.0 ( -86.77 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1ION.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ION-query.scw
PDB file :
Tito_Scwrl_1ION.pdb
: