Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKIANTEVEINIFNLLKKLWKKKFLITFVAIAFATAGLFYSLFIVTPQYTSSTRIYVINPNTPNNSITAQDLQAGSFLANDYKEIITSTDVLEKVISSEKLNYPSSQLLQKITVSILKDTRVISISVEDANPKMSQKLANSVREAAVSKIKAVTQVEDITTLEKGNLPKAPSSPNIKKNVLIGFIVGAGLSTIVLVIMGILDDRVNTEEDIEKVLGLTSLGIVSDLNKL
3LY1 Chain:A ((139-216))-------------------------------------------------YSGPSIVYLVNPNNPTGT-------------------ITPADVIEPWIASKPAN--TMFIVDEAYAEFVNDPRFRSIS-----PMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLKLPYLPSEGN


General information:
TITO was launched using:
RESULT:

Template: 3LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3926 for 474 contacts (-8.3/contact) +
2D Compatibility (PS) -7912 + (NN) -155 + (LL) 6764
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -12529.0 ( -26.43 by residue)
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_3LY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LY1-query.scw
PDB file : Tito_Scwrl_3LY1.pdb: