Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKIANTEVEINIFNLLKKLWKKKFLITFVAIAFATAGLFYSLFIVTPQYTSSTRIYVINPNTPNNSITAQDLQAGSFLANDYKEIITSTDVLEKVISSEKLNYPSSQLLQKITVSILKDTRVISISVEDANPKMSQKLANSVREAAVSKIKAVTQVEDITTLEKGNLPKAPSSPNIKKNVLIGFIVGAGLSTIVLVIMGILDDRVNTEEDIEKVLGLTSLGIVSDLNKL |
3LY1 Chain:A ((139-216)) | -------------------------------------------------YSGPSIVYLVNPNNPTGT-------------------ITPADVIEPWIASKPAN--TMFIVDEAYAEFVNDPRFRSIS-----PMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLKLPYLPSEGN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3926 for 474 contacts (-8.3/contact) +
2D Compatibility (PS) -7912 + (NN) -155 + (LL) 6764
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -12529.0 ( -26.43 by residue)
QMean score : 0.323
|
|
|