Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITF-----PEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK
4N1T Chain:A ((7-136))
-SRLYTLVLVLQPQRVLL---GMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVH-----VFCTDSIQGTPVESDEMRPC---WFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
4N1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41343 for 911 contacts (-45.4/contact) +
2D Compatibility (PS) -13454 + (NN) -5142 + (LL) 1176
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -70463.0 ( -77.35 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_4N1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N1T-query.scw
PDB file :
Tito_Scwrl_4N1T.pdb
: