Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQVDPEKFSKGLLLDSLSITPVTEDIVTLAASAANDILSDE--DKETIDMVIVATESSIDQSKAASVYVHQLLEI--QPFARSFEMKEACYSATAALDYAKLHVEKHP-DSKV-LVIASDIAKYGIKSTGESTQGAGSIAMLISQNPSILELKEDRLAQTRDIMDFWRPNY-SDVPYVNGMFSTKQYLDMLKTTWKEYQKRFNT------SLSDYAAFCFHIPFPKLALKGFNKILDNN-------LDEQKKAE--------LQENFEH----------SITY-----------SKKIGNCYTGSLYLGLLSLLENSQNLKAGDQIAFFSYGSGAVAEIFTGQLVDGYQNKLQSDRMDQLNKRQKITVTEYEKLFFEKTILDENGNANFNTYRTGTFSLDSICEHQRIYKKINN |
2FA0 Chain:A ((33-371)) | -------------------------------KYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYA-EGPARPTGGAAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129862 for 2367 contacts (-54.9/contact) +
2D Compatibility (PS) -30552 + (NN) -10752 + (LL) 2868
1D Compatibility (HY) -21200 + (ID) 5050
Total energy: -194548.0 ( -82.19 by residue)
QMean score : 0.401
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