Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSS-IPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
2IDL Chain:B ((4-116))
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILELNEDEGGYLMVEIPKDLPSHQREMTQLFFESFFLGMANLSENYSEFVQTRVITE
General information:
TITO was launched using:
RESULT:
Template:
2IDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81623 for 804 contacts (-101.5/contact) +
2D Compatibility (PS) -11989 + (NN) -4190 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -113202.0 ( -140.80 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2IDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IDL-query.scw
PDB file :
Tito_Scwrl_2IDL.pdb
: