Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIKDFASRAINTRLGFILLLVVIYWLKTIWAYHTDFYLGLENSYQLFLTIINPIPLGLLIIGLALYVKRTKAFYITAFITYAIVNILLIANAIYYREFSDFITVSAVLASSKTSAGLGDSALNLLRIWDLVYVFDFIILIFLFATKKIHLDDRPFNKRASFSITALSGLLFSINLFLAEIDRPELLSRGFSNTYIVKALGLPSFSIYSGNQTYQAQKERNGATAQELATAKKYVAEHYAKPNPEYYGIGKGRNVIMIHLESFQQFLIDYKLNVDGKEHVVTPFINSLYHSKETIS-FSNFFHQVKAGKTSDAETLMENSLFGLSSGSFMVNYGGENTQFAAPHILAQNGGYSSAVFHGNVGTFWNRNNAYKQWGYDYFFDSSYFSKQTKDNSFQYGLNDKYMFADSIKYLEHMQQPFYTKFITVSNHYPYTSLKGESDEEGFPLAKTN--DETINGYFATANYLDTALKSFFEYLKAAGVYDNSIIVMYGDHYGISNTRNPSLAELLGKD--PETWSEYDNAMLQRVPYMIHIPGYSKGFISNTYGGEVDNLPTLLHILGIDTSKYTQLGQDLLSKDNKQMVAMRTTGQYITPKYTNYSGHLYYTDSGQEITNPDETTKAEIKAIRDATNKQLSTSDSIQTGDLLRFDENNGLKTVEVEKFNYTHSLKALKAKERKLKDRSTSIYSKHNNKSTVDLFHAPSYLELQDPNKTHKTSKK |
| 2W5R Chain:A ((1-419)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVN--GKE--VTPFLNKLSSGKEQFTYFPNFFHQTGQGKASDSEFTMDNSLYGLPQGS-AFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDK-NVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTL-----DEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTD-----LNRTGFWIKIPGKSGG-INNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFR-NGDFITKDYKYVNGKIYSNKNNELIT----TQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPK------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130342 for 3649 contacts (-35.7/contact) +
2D Compatibility (PS) -44907 + (NN) -19344 + (LL) 22788
1D Compatibility (HY) -39200 + (ID) 9550
Total energy: -220555.0 ( -60.44 by residue)
QMean score : 0.501
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