Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEIDYKKVTGMIHSTESFGSVDGPGIRFIIFMQ-GCKMRCQYCHNPDTWEME--TNNSKERTVEDVLKEALRYKHF--------------------WGKDGGITVS-GGEAMLQIDFITALFIEAKKLGIHTTLDTCGFAYRATPEYHAILEKLLDVTDLVLLDLKEIDPEQHKIVTR---QSNKNILQFARYLSDRGTPVWIRHVLVPGLTDIDDHLKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKT-ESYTEYLKRIQN |
2Z2U Chain:A ((47-289)) | ---------------------IETHRCIQCTPSVIWCQQN-------------SQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALE-PKHVAISLSGEPTLYPYL-DELIKIFHKNGFTTFVVSNGILTD-------VIEKI--EPTQLYISLDAYDLDSY----GGKKEYWESILNTLDILKEKK-RTCIRTTLIRG---YNDDILKFVELYERAD-VHFIELKSYM-------------------DMLQHDEILKLAKMLDENSSYKLIDDSEDS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95862 for 1346 contacts (-71.2/contact) +
2D Compatibility (PS) -20157 + (NN) -11728 + (LL) 4612
1D Compatibility (HY) -11200 + (ID) 1650
Total energy: -135985.0 ( -101.03 by residue)
QMean score : 0.566
|
|
|