Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDIVKDIKNHYLGKVDAIFHNGDSELPSSDPIWEGIHVVTGNCDYDSGYPEVLVTKIDNTVIVQTHGHLHQINFTWD---KLDLLAQQEDADICLYGHLHRADAWKNGKTIFINPGSVLQPRGPINEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
2R17 Chain:A ((57-135))
--------------------------------------------------VHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGH--QV-IPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIE
General information:
TITO was launched using:
RESULT:
Template:
2R17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28029 for 478 contacts (-58.6/contact) +
2D Compatibility (PS) -8761 + (NN) -8140 + (LL) 2536
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -49494.0 ( -103.54 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2R17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R17-query.scw
PDB file :
Tito_Scwrl_2R17.pdb
: