Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 3VVF Chain:A ((21-257)) | ----------------------GSEFQVRSFEEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPH-YCTGGVIVSRKGGPR-TAKDL---QGKVVGVQVGTTYMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWITDRF---VAKEAIKERKLENTLQVGELVFQ-ERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWF-GEDVRCK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25612 for 1999 contacts (-12.8/contact) +
2D Compatibility (PS) -25616 + (NN) -9927 + (LL) 3172
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -73583.0 ( -36.81 by residue)
QMean score : 0.394
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