Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEV----KKVIKDTSADIPQW |
3TQW Chain:A ((4-235)) | ---------------------------------MVRVGTIAGPETQLMEVAKQVALNRYGLHVNIITFSDYNTPNEALADGSVDANMFQHLPYLKAQIEMRGYKIVSIGKTFVYPMGLYSKKITALTQLKTGAKIAVPSDPSNEARALLLLEKAQLIQLKTH--INATPMDIASNPKKLKIVELDAAQLSRSLGDVDLAAINTNYAIPAGLSPSRDALLTEGPN---SPYANVVAVRED---DKNDPRLKQLVSALHSPAVLSAAKKIFGDGAIPA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25840 for 1868 contacts (-13.8/contact) +
2D Compatibility (PS) -23919 + (NN) -5865 + (LL) 2840
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -74134.0 ( -39.69 by residue)
QMean score : 0.339
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