Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYVKDGKLTGFDIEVAKAVFKGSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSERSQKYLFSYPIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNENITQILTNLSDGKADFKLFDGLTVNAIIKNQGLTNLKTI--PLTMRDQPYIYFIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK |
2Q2A Chain:A ((41-262)) | ---------------------------------KKKVVVGTDAAFAPFEYMQKGKIVGFDVDLLDAVMKAA-GLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNALDLKG-KTIGVQNATTGQ--EAAEKLFGKGPHIKKF--ETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASE-YYGMIFPKNS-ELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLDRLKQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85991 for 1829 contacts (-47.0/contact) +
2D Compatibility (PS) -24098 + (NN) -12547 + (LL) 2708
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -136978.0 ( -74.89 by residue)
QMean score : 0.422
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