Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMSDLEGKQAEEVVGTALDLGINFFDHADIYG-GGLSELRFRDAIKHLNVNRDKMIIQSKCGIREGYFDFSK-----EYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLF-------VNHPDYKELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 3V0T Chain:A ((5-305)) | ---KLGTQGLEVSKLGFGCMGLS--PEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLP--REKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIR--RAHAVHPVTALQIEYS---------------LWTRDIE--DEIVPLCRQLGIGIVPYSP----IGRGLFWGKAIKE---------YYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPWKFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129403 for 2146 contacts (-60.3/contact) +
2D Compatibility (PS) -27702 + (NN) -12876 + (LL) 2404
1D Compatibility (HY) -20400 + (ID) 4100
Total energy: -192077.0 ( -89.50 by residue)
QMean score : 0.541
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