Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVND--SHGAYSGSALA---------IDDK--LFLFYTG---------NVRDMKWNRDPRQIGAWMTSDG-KITKFDKVLISQPNDVT------EHFRDPQIFNYD-NQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMI-ECPNIIFV---KGKPVLLYSPQGLDKNELDYQNIYPNTYKIGQY----FDANSSKIVEPSPIYN-LDYGFEAYATQGFNTSDGRAFI-VSWIGLPDIDYPSDQFDYQGAMSLVKELSIKN----GNLYQYPVPAMKNLRQHQAEFKTQLQT-----------NNTYELEL-LVPRNDLSSFVLF----ANPKGQGLSITIDTAKGKVIVDRSQAGQ-QYATEFGTSRQCNIPKDATSV---NVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKEGHVHGKYFELKY |
| 1Y4W Chain:A ((6-498)) | ------------------------------PYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSI-AYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVVV----TSIAELHKLAIYTSDNLKDWKLVS--EFGPYNAQGGVWECPGLVKLPLDSGNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAKSKASTFAIALRASANFTEQTL-VGYDFAKQQIFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSDAVHARLASTGGTTEDVRADI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82256 for 3591 contacts (-22.9/contact) +
2D Compatibility (PS) -46043 + (NN) -11147 + (LL) 1716
1D Compatibility (HY) -21600 + (ID) 5650
Total energy: -164980.0 ( -45.94 by residue)
QMean score : 0.360
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