Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEITWTVKYITEFIATAFLIILGNGAVANVDLKGTKGNN--------------SGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL
2F2B Chain:A ((2-243))---VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFI--------FLQCAG----IGA-ATVGGL-GATAPFPGISYWQAMLAEVVGTFLLMITIMGIA--------VDERAPKGF-------------------AGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDL--------WNYYSIYVIGPIVGAVLAALTYQYLTS


General information:
TITO was launched using:
RESULT:

Template: 2F2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169169 for 2100 contacts (-80.6/contact) +
2D Compatibility (PS) -23566 + (NN) -6777 + (LL) 3536
1D Compatibility (HY) -24000 + (ID) 3750
Total energy: -223726.0 ( -106.54 by residue)
QMean score : 0.284

(partial model without unconserved sides chains):
PDB file : Tito_2F2B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F2B-query.scw
PDB file : Tito_Scwrl_2F2B.pdb: