Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYYLSIDYGGTNTKALIFDKLGHQIAVSSFETLKNETQSGHRQVNLVKTWNAITSAIREVIQISKLSPEQISAVACIGHGKGLYLLDNKLEPL--------EQGILS-TDNRAKDLAQYFESKLDNIWELTRQHIFPSQSPVILRWLKDYQPETYKSIGAVLSAKDFIRYKLTGKVQQEYGDASGNHWINF-QTGTYDPAILDFFGIREIENSLPELIDSADLVPG-----GISSQAAKETGLVEGTPVVGGLFDIDACALG----SGVLESDTF----SVISGTWNINTYPSLKPAKQDSGLMTSYFP---DRRYLLEASSPTSAGNLNFMLKM--LMHQEIDNAKSSGGSIYDNLEEFLTHTDATHHGLIF-------FPFLYGSNTSQDASACFFGL-------TTKSTKSQMIRAVYEGIAFAHKQHITDLIKSRGSVPKIIRFSGGATNSPAWMQMFSDILNFPIETVEGTELGGLGGAILARHALDKI-SLKEAVQDMVRVKAIYKPQLSEVKG-YKKKYHAYQKLLETLDPIWSELGHLNK |
| 3GG4 Chain:A ((5-531)) | -SYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLG-FDATCSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRAT-KDETRSLCSTVCKWTYLGHEDRWDPSY---VGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGV-ENANFDRRIALIGGTSTAHMAMS-RSAHFISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHG-NRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALG-TRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQALMQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165668 for 4322 contacts (-38.3/contact) +
2D Compatibility (PS) -50287 + (NN) -12379 + (LL) 1200
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -253084.0 ( -58.56 by residue)
QMean score : 0.447
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