Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREKGMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPSNNEEALALTMPSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNGGRIGVITVVEGGDDALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
3AVW Chain:A ((2-278)) | -AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA-------QFEEERVALVAKIGENINIRRVAALEG---DVLGSYQH-GARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEY---------------------------------------QVQLDIAMQ---SGKPKEIAEKMVEGRMKKFT-------GEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQSHMS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93817 for 2103 contacts (-44.6/contact) +
2D Compatibility (PS) -30512 + (NN) -15704 + (LL) 3996
1D Compatibility (HY) -16800 + (ID) 6500
Total energy: -159337.0 ( -75.77 by residue)
QMean score : 0.504
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