Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLNDRLKIEEMEEKYDSFKPRINALVEAIDDFQKHYEDYVKLREFYGSEDWFRLSEQTENNLKCGVLSEDQLFDFIGEHNELVGQFLDMSSQMYRHL
2J69 Chain:A ((361-387))
--------VNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELNLFDFLSSGKREAFNAALQKAFEQ
General information:
TITO was launched using:
RESULT:
Template:
2J69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -386 for 101 contacts (-3.8/contact) +
2D Compatibility (PS) -2892 + (NN) -74 + (LL) 488
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -5364.0 ( -53.11 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2J69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J69-query.scw
PDB file :
Tito_Scwrl_2J69.pdb
: