Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDAFADVAKMKKIKEDIKSHEGQMVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE |
1TH7 Chain:A ((2-40)) | -----AMNFLAETAHKVLAESLNNLVLVKLKGNK----EVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TH7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1539 for 161 contacts (9.6/contact) +
2D Compatibility (PS) -3934 + (NN) 2062 + (LL) 1508
1D Compatibility (HY) -400 + (ID) 250
Total energy: 525.0 ( 3.26 by residue)
QMean score : 0.562
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