Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAQSSFLQLNSIFISILIEAIPFILIGVILSGIIQMFVSEEMIARIMPKNRFLAVLFGALAGVLFPACECGIIPITRRLLLKGVPLHAGVAFMLTAPIINPIVLFSTYIAFGNRWSVVFYRGGLALAVSLIIGVILSYQFKDNQLLKPDEPGHHHHHHGTLLQKLGGTLRHAIDEFFSVGKYLIIGAFIAAAMQTYVKTSTLLAIGQNDVSSSLVMMGLAFVLSLCSEVDAFIASSFSSTFSLGSLIAFLVFGAMVDIKNLLMMLAAFKKRFVFLLITYIVVIVLAGSLLVKG
1RH5 Chain:B ((29-53))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKDEYLAVAKVTALGISLLGIIGYI-------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1RH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 7 -304 -43.36 -12.14
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.39

3D Compatibility (PKB) : -43.36
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.39
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_1RH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RH5-query.scw
PDB file : Tito_Scwrl_1RH5.pdb: