Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIGALIVGFTSLFTRAWPKIGALLNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYGVGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTILFAAWGMGGPIGFGTILTAILTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH
3HE8 Chain:A ((58-81))-------------------------------------------------------------------------------------------------------------CDRGIVICGTGLGISIAANKVPGI----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 25 -4658 -186.30 -194.06
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.39

3D Compatibility (PKB) : -186.30
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.39
QMean score : -0.042

(partial model without unconserved sides chains):
PDB file : Tito_3HE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HE8-query.scw
PDB file : Tito_Scwrl_3HE8.pdb: