Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTERKEDLHQQLKEIEKWEKDQQKVWFWEKLSRLPFQLLDKLTPEFIQKKIGKLLDEVGSFVQTGGQYLTSEKQIIRMFQKKLPEEIFESLEDIRKAPLPVMDEIAEGMGKNRTNAATVQGATTGVGGVFTLAADIPAVLGLSLKTLQDIAVAYGYDPKEKKERVFIVKCLQLTSADVVGKRSILQELKHYDQDRTYKNVASQIQGWREVVLGYRDTFGWKKLFQIVPVAGMVFGAAANRSTLNDITETGMMLYKKRRILERLKETEREME
4LV5 Chain:B ((377-401))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQEFCLANGYLLPKNSFLKEIFYLK------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 39 -9630 -246.92 -385.20
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.54

3D Compatibility (PKB) : -246.92
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.54
QMean score : -0.125

(partial model without unconserved sides chains):
PDB file : Tito_4LV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LV5-query.scw
PDB file : Tito_Scwrl_4LV5.pdb: