Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGKTNVPEHPKRVVVLELGFIDTLLDLGITPVGVADD--NKAKQLINKDVLK--KIDGYTSVGTRSQPSMEKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAKAVGKEKEMEKKLTAHEEKLSETKQKISANSQ-------SVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNMKMTLEQLLKTDPDVIILMTGKTDDLDADGKRPIEKNVL----WKKLKAVKNGHVY-HVDRAVWSLRRSVDGANAILDELQKEMPAAKK
3MWF Chain:A ((7-291))----------------------------------SIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKI-----VGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTV-FKFKDT---TKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA---GGYAGEILNDLGFKRNKDLQKQVD--NGKDIIQL-TSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKL-----


General information:
TITO was launched using:
RESULT:

Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1443 -94855 -65.73 -352.62
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -65.73
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_3MWF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MWF-query.scw
PDB file : Tito_Scwrl_3MWF.pdb: