Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNITWVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVASKAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKE--EAVQEGIK-LGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
4UN3 Chain:B ((755-860))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRHKPENIVIEMAR--------NSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGR-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 99 19774 199.74 346.91
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : 199.74
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_4UN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UN3-query.scw
PDB file : Tito_Scwrl_4UN3.pdb: