Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQ-------NTAIIMGGTGSPIPTPSYVNAITTLFIDPVV---SNPVVKALVTPEELYPITGVKSLPFQTSVQLG-LQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 1DO8 Chain:A ((345-451)) | ------------------------------------------------------------------------------------------------------------------------------------------------FTHSAPESIPDTFEDAVNILKPSTIIGVAGAGR-LFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCL-FASGSPFGPVKLTDGRVFTP-GQGNNVYIF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36015 for 606 contacts (-59.4/contact) +
2D Compatibility (PS) -10002 + (NN) -4109 + (LL) 30496
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -26380.0 ( -43.53 by residue)
QMean score : 0.208
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