Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLAGVSGVRAALAERL------------------------PQRRFVETAELGPGD----------------APVAVVFVVSAATALTESDCVLLDTAAE---HTDAVVAVVSKIDVHRGW------RDV----LTSNRDRLAARAS----RYARVPWVGAAAAPE-L-------------GEPYLDDLVAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQSKSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREMPAVRAALEAVRAELGEPGAPTTGLF |
| 4AUR Chain:A ((51-263)) | ------------------------------SDVLRI-ALLGAFSDGKTSVIAAWLGKVMDDMNISMDESSDRLSIYKPEGLPDQCEIVDTPGLF---DGRLVMYEDLTRRYISEAHLIFYVVDATNPLKESHSDIVKWVLRDLNKLSSTIFVINKMDEVTSLTDQALFDEQAAIKKANLKGKLQRAADLTAQECEQLNIVCVASNPNGRGLTYWFTKPEHYESRSRINDLKNAATEILKT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76686 for 973 contacts (-78.8/contact) +
2D Compatibility (PS) -13766 + (NN) 1085 + (LL) 29864
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -66853.0 ( -68.71 by residue)
QMean score : 0.528
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