Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQPSGLKNLLRAAAGALPVVPRTDQLPNRTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDFPFAAMGAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFLHQQRTSLSGEPKPPPQKKPKLPPPAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGFPTVIAHGMFTAAAVLANIEARFPD---AVRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL |
4RLJ Chain:B ((27-99)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVP----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36849 for 414 contacts (-89.0/contact) +
2D Compatibility (PS) -7832 + (NN) -2893 + (LL) 12708
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -41016.0 ( -99.07 by residue)
QMean score : 0.379
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