Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVVLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVAARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQ---DVAGCGAQSCVKAEM--LVGTPAMWWLAVPVLAYAGWRMFVRRDW-RYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLYPVLTGLPISQQTWNLEIWLPSWR |
| 2GNH Chain:A ((166-247)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLKPENLLIDQQGYIKVADFGFAKRVKGRTWTLCGTPE--YLAPEIILSKGYNKAV--DWWALGVLIYEMAAGYPPFFADQPIQIY------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44508 for 420 contacts (-106.0/contact) +
2D Compatibility (PS) -7401 + (NN) 902 + (LL) 31840
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -26667.0 ( -63.49 by residue)
QMean score : 0.014
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