Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSEHPMTDRVVYRSLMADNLRWDALQLRDGDIIISAPSKSGLTWTQRLVSLLVFDG-PDL--PGPLSTVSPWLDQTIRPIEEVVATLDAQQHRRFIKTHTPLDGLV---LDDRVSYICVGRDPRDAAVSMLYQSANMNEDRMRILHEAVVPFHERIAPPFAELGHARSPTEEFRDWMEGPNQPPPGIGFTHLKGIGTLANILHQLGTVWVR-RHLPNVALFHYADYQADLAGELLRPARVLGIAATRDRARDLAQYATLDAMR----SRASEIAPNTTDGIWHSDERFFRRGGSGDWQQFFTEAEHLRYYHRINQLAPPDLLAWAHEGRRGYDPAN |
| 1Q1Z Chain:A ((32-276)) | --------------SLESISLAENTQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPWCETIVGAF-----SLPD--SPRLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYS--------------------KIA---GQLKDPGTPDQFLRDFLKGEVQ--FGSWFDHIKG--------------WLRMKGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLD---HRRGAFLRKGVCGDWKNHFTVAQ------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68516 for 1754 contacts (-39.1/contact) +
2D Compatibility (PS) -25409 + (NN) -16352 + (LL) 6240
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -124437.0 ( -70.94 by residue)
QMean score : 0.319
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