Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE
2KRU Chain:A ((23-47))
-----------------------------KKVRKNTDN-YAREIGEPVVTADVFR------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2946 for 111 contacts (26.5/contact) +
2D Compatibility (PS) -2531 + (NN) -499 + (LL) 2904
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 1370.0 ( 12.34 by residue)
QMean score : 0.826
(partial model without unconserved sides chains):
PDB file :
Tito_2KRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KRU-query.scw
PDB file :
Tito_Scwrl_2KRU.pdb
: