Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRALIIVDVQNDFCEG-GSLAVTGGAALARAISDYLAEA-ADYHHVVATKDFHIDPGDHFSGTPDYSSS-----------------------WPPHCVSGTPGADFHPSLDTSAIEA---VFYKGAYTGA--YSGFEGV-DENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTV--AALEEMRTASVELVCSS
2H0R Chain:A ((1-214))
MKTLIVVDMQNDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIVVTRDWH--PSRHISFAKNHKDKEPYSTYTYHSPRPGDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMNKYLEKHHTDEVYIVGVALEYCVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVV---
General information:
TITO was launched using:
RESULT:
Template:
2H0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110073 for 1485 contacts (-74.1/contact) +
2D Compatibility (PS) -20026 + (NN) -9815 + (LL) 128
1D Compatibility (HY) -18000 + (ID) 3300
Total energy: -161086.0 ( -108.48 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_2H0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H0R-query.scw
PDB file :
Tito_Scwrl_2H0R.pdb
: