Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSGGGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARD---KARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDLRYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
3AIO Chain:A ((41-299)) | -------------------------------------------------------------------------------ASVEE----IRSLFKQFSSLTPREEVG-KIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-SEKFNGKYG-IAVGGDSAGGNLAAVTAILSKKENIKLKY--------QVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR-SFADLLDFRFSPILAD-LNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVKFNNVIHGFVSFF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141954 for 2270 contacts (-62.5/contact) +
2D Compatibility (PS) -27695 + (NN) -19993 + (LL) 6656
1D Compatibility (HY) -19600 + (ID) 5600
Total energy: -208186.0 ( -91.71 by residue)
QMean score : 0.515
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