Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSL--LYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVG-NHAAKFQGFVNYVGDKGEDYN--DKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
| 1TLY Chain:A ((9-246)) | -------------------LSDWWHQSVNVVGSYHTRFGPQI----RNDTYLEYEAFAKKDWFDFYGYADAPV---------------PLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNK-DGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYG-----AANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSHILALN-YDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10930 for 1504 contacts (-7.3/contact) +
2D Compatibility (PS) -22871 + (NN) -2289 + (LL) 1404
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -41086.0 ( -27.32 by residue)
QMean score : 0.018
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