Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPNPAELLPRMASDLRAHLAERGIERPRFVGIHTGGIWVAEALLREL----GNQEPLGTLDVSFYRDDFTQNGLH-PQVRPSALPFEIDGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLNARELPIRPDVVGQTLSLGRDERVKLVGPAPLALERKVLSSAS
1A4X Chain:A ((29-162))
-----------------------KGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYR---------EPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYEN-
General information:
TITO was launched using:
RESULT:
Template:
1A4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98255 for 922 contacts (-106.6/contact) +
2D Compatibility (PS) -12816 + (NN) -3489 + (LL) 1876
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -129984.0 ( -140.98 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_1A4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A4X-query.scw
PDB file :
Tito_Scwrl_1A4X.pdb
: