Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
2IYN Chain:A ((4-120))
--RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARG---------ETGADDYITKPFSPKELVARIKAVMR-
General information:
TITO was launched using:
RESULT:
Template:
2IYN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60720 for 808 contacts (-75.1/contact) +
2D Compatibility (PS) -11613 + (NN) -6568 + (LL) 1000
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -90151.0 ( -111.57 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_2IYN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IYN-query.scw
PDB file :
Tito_Scwrl_2IYN.pdb
: