Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLGLETSCDETGVALYDSERGLLADALFSQIDLHRVYGGVVPELASRDHVKRMLPLIRQVLDESGCTPADIDAIAYTAGPGLVGALLVGASCAQAMAFAWGVPAVGVHHMEGHL-LAPMLEEQPPRFPFVALLVSGGHTQLVRVDGIGRYQLLGESVDDAAGEAFDKTAKLIGLGYPGGPEIARLAERGTPGRFV-FPRPMTDRPGLDFSFSGLKTFTLNTWQRCVEAGDDSEQTRC-DIALAFQTAVVETLLIKCRRALKQTGLKNLVIAGGVSANQALRSGLEKMLGEMKGQVFYARPR-FCTDNGAMIAYAGCQRLLAGQHDGPAISVQPRWPMESLPAV |
| 2IVO Chain:A ((1-301)) | MLALGIEGTAHTLGIGIV-SEDKVLAN-VFDTLTTEK--GGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGVKDP----VGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGE--KYIELPYAV---KGMDLSFSGLLTEAIRKYR--------SGKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREML-RIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEVEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198608 for 2649 contacts (-75.0/contact) +
2D Compatibility (PS) -32963 + (NN) -25125 + (LL) 920
1D Compatibility (HY) -25600 + (ID) 6000
Total energy: -287376.0 ( -108.48 by residue)
QMean score : 0.484
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