Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNVRNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFYPQAICGVVHDSGVRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLK-HHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREWGAKIAASDRS |
1P1M Chain:A ((41-392)) | ---------------------------------------------------------DLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDR-LTEKMAYYGTILAQMEMARHGIAGFVDMYFHEEWIAKAVRDFGMRALLTRGLVD----SNGDDGGRLEENLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKE---------EYDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKA--QNPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFSGE-VFATMVAGKWIYFDGEYPTIDSEEV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181192 for 3200 contacts (-56.6/contact) +
2D Compatibility (PS) -37932 + (NN) -15183 + (LL) 7296
1D Compatibility (HY) -26000 + (ID) 6150
Total energy: -259161.0 ( -80.99 by residue)
QMean score : 0.426
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