Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHRIVIVGGGAGGLELATRLGRTLGKRGKAQVTLVDANLTHIWKPLLHEVAAGSLNSS---EDELNYVAQAKWN--HFEFQLGRMQGLDRAGKRVRLAALVD-----EN--GVELVPERDIAYDTLVIAVGSTTNDFGTEGAAEHCIFLDTRAQAERFHRQLLGQYLRAH---TGHDANNNAVSIAIIGAGATGVELAAELHHAAQMLAAYGLDRIRP---EDLHISLVEAGPRVLPALPERISQPVHQTLSKLGVRVMTGSAVSKVDADGLWTG----DG----EFVPATLKVWAAGIRAPAFLKELDGL--ESNRINQ-LVVRPTLQTTRDDDIFAFGDCAACPQPAQPGEQPRNVPPRAQAAHQQASLLV-------------KSLRAR----LEGKPLGEYHYRDYGSLISLSRFSAVGNLMGN----LMGSVMLEGWLARMFYVSLYRMHQMALYGPLRTAMLMLSGRLRSTEPRLKLH |
| 4GAP Chain:A ((14-443)) | ----VLILGSGWGAISFLKHIDTK-----KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINP-DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQ----DLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA-----------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQK-----IDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSM--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243233 for 3034 contacts (-80.2/contact) +
2D Compatibility (PS) -39476 + (NN) -5991 + (LL) 4356
1D Compatibility (HY) -22400 + (ID) 5500
Total energy: -312244.0 ( -102.91 by residue)
QMean score : 0.420
|
|
|