Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRLYRKRIVLGVGGGIAAYKSAELVRRLRDQGAEVRVVMTQGGREFITPLTL-QALSGHPVHTDLLDPAAEAAMG----HIELARWADLVLIAPATADLMARLVQGVANDLLTTLVLATDAQ--IALAPAMNQAMWRDTATQANAELLRQRGFHLFGPAAGSQACGDVGLGRMLEAEELAQRAADCFQRQALTGVHVLITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLVTGPVHLPTPDRVQRVDVVSARDMLAACEAAMPCDLLIASAAVADYRPEVVAAHKLKKDPTSGEGLLLQLVRNPDILATLAQREDRPFSVGFAAETENLLDYAARKLKDKNLDLIVANDVANPSIGFNSDENAITVIDRDLHPSTFAQTSKGKIARQLVAFIADRLNQQ |
| 1MVL Chain:A ((19-200)) | -----KPRVLLAASGSVAAIKFGNLCHCFTEW-AEVRAVVTKSSLHFLDKLSLPQEVT---LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIK---------NGAMAEPSLIYSTVRLFWESQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132614 for 1364 contacts (-97.2/contact) +
2D Compatibility (PS) -18216 + (NN) -9027 + (LL) 15520
1D Compatibility (HY) -14000 + (ID) 2700
Total energy: -161037.0 ( -118.06 by residue)
QMean score : 0.538
|
|
|