Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
3NR3 Chain:A ((22-153))
--SMNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEKV-
General information:
TITO was launched using:
RESULT:
Template:
3NR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44032 for 951 contacts (-46.3/contact) +
2D Compatibility (PS) -14779 + (NN) -2905 + (LL) 456
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -78560.0 ( -82.61 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3NR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NR3-query.scw
PDB file :
Tito_Scwrl_3NR3.pdb
: