Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
1CBS Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGELILTMTADDVVCTRVYVRE
General information:
TITO was launched using:
RESULT:
Template:
1CBS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33567 for 974 contacts (-34.5/contact) +
2D Compatibility (PS) -15255 + (NN) -3636 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 6400
Total energy: -77050.0 ( -79.11 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1CBS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBS-query.scw
PDB file :
Tito_Scwrl_1CBS.pdb
: