Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVLLGLLQSGGSVLGQAMEQVTGGNLLSTLLIACAFTLSLVYLFRLAVGHMVQLPAGAKSPPYIYSPIPFLGHAIAFGKSPIEFLENAYE--KYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEEVYGRLTTPVFGKGVAYDVPNAVFLEQKKILKSGLNIAHFKQYVSIIEKEAKEYF-KSWGES-GERNVFEALSELIILTASHCLHGKEIRSQLNEK-VAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKNIFYKAI---QKRRLSKEPAEDILQTLLDSTYKDGRPLTDDEIAGMLIGLLLAGQHTSSTTSAWMGFFLARDKPLQDKCYLEQKTVCGEDLPP-LTYEQLKD-LNLLDRCIKETLRLRPPIMTMMRMAKTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLINGYFPSVNYTTMIHTP--ENPVIRYKRRSK |
4H6O Chain:A ((4-451)) | ----------------------------------------------------------KTPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYT-IMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFM-----LPQSARCREARAELQKILGEIIVAREKE-------SDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPK---NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDG---AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPDYHTMVVGPTLNQCLVKYTRKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238050 for 3454 contacts (-68.9/contact) +
2D Compatibility (PS) -45271 + (NN) -23086 + (LL) 6064
1D Compatibility (HY) -38000 + (ID) 7400
Total energy: -345743.0 ( -100.10 by residue)
QMean score : 0.397
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