Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLVLAVLLTVGAAQEGISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
2B00 Chain:A ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
2B00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63619 for 893 contacts (-71.2/contact) +
2D Compatibility (PS) -13359 + (NN) -8142 + (LL) 2296
1D Compatibility (HY) -17600 + (ID) 6200
Total energy: -106624.0 ( -119.40 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_2B00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B00-query.scw
PDB file :
Tito_Scwrl_2B00.pdb
: